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  5. LOC_Os04g38770

LOC_Os04g38770


Description : OsMADS61 - MADS-box family gene with MIKCc type-box, expressed


Gene families : OG_42_0000009 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g38770
Cluster HCCA clusters: cluster_0022

Target Alias Description ECC score Gene Family Method Actions
A4A49_18077 No alias floral homeotic protein apetala 1 c 0.03 Orthogroups_2024-Update
A4A49_29655 No alias floral homeotic protein globosa 0.03 Orthogroups_2024-Update
At2g34440 No alias AGL29 [Source:UniProtKB/TrEMBL;Acc:A0A178VU29] 0.02 Orthogroups_2024-Update
At4g11880 No alias Agamous-like MADS-box protein AGL14... 0.02 Orthogroups_2024-Update
At5g51860 No alias MADS-box protein AGL72 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLH5] 0.04 Orthogroups_2024-Update
Bradi4g34680 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Bradi5g21700 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Brara.J00748.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.04G043800 No alias AGAMOUS-like 66 0.03 Orthogroups_2024-Update
Glyma.06G117600 No alias K-box region and MADS-box transcription factor family protein 0.04 Orthogroups_2024-Update
Glyma.10G084800 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.10G085900 No alias AGAMOUS-like 62 0.02 Orthogroups_2024-Update
Glyma.13G034100 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
Glyma.18G004700 No alias K-box region and MADS-box transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G110470.1 No alias MADS/AGL-type transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G002270.1 No alias MADS/AGL-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os03g03070 No alias transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_211156g0010 No alias (q40885|ag_pethy : 164.0) Floral homeotic protein... 0.02 Orthogroups_2024-Update
MA_35712g0010 No alias (at4g11880 : 102.0) AGL12, AGL14, and AGL17 are all... 0.02 Orthogroups_2024-Update
Potri.002G151700 No alias AGAMOUS-like 20 0.03 Orthogroups_2024-Update
Potri.004G002400 No alias AGAMOUS-like 62 0.03 Orthogroups_2024-Update
Solyc06g059970 No alias TPI 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005783 endoplasmic reticulum IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 10 57
No external refs found!