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  5. LOC_Os04g39880

LOC_Os04g39880


Description : Os4bglu12 - beta-glucosidase, exo-beta-glucanase, expressed


Gene families : OG_42_0000033 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000033_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g39880
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
408050 No alias beta glucosidase 41 0.02 Orthogroups_2024-Update
Bradi2g27770 No alias beta glucosidase 11 0.02 Orthogroups_2024-Update
Brara.K01020.1 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
GRMZM2G426467 No alias beta glucosidase 13 0.04 Orthogroups_2024-Update
HORVU3Hr1G096940.3 No alias EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
LOC_Os04g39840 No alias Os4bglu10 - beta-glucosidase homologue, similar to... 0.02 Orthogroups_2024-Update
LOC_Os04g39864 No alias Os4bglu11 - beta-glucosidase homologue, similar to... 0.03 Orthogroups_2024-Update
LOC_Os07g46280 No alias Os7bglu26 - beta-mannosidase/glucosidase/exoglucanase, expressed 0.03 Orthogroups_2024-Update
PSME_00011816-RA No alias (at3g18080 : 295.0) B-S glucosidase 44 (BGLU44);... 0.02 Orthogroups_2024-Update
PSME_00018864-RA No alias (at1g26560 : 450.0) beta glucosidase 40 (BGLU40);... 0.02 Orthogroups_2024-Update
PSME_00034327-RA No alias (at1g02850 : 276.0) beta glucosidase 11 (BGLU11);... 0.02 Orthogroups_2024-Update
Seita.2G270500.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sopen02g025010 No alias Glycosyl hydrolase family 1 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0004615 phosphomannomutase activity IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009225 nucleotide-sugar metabolic process IEP Predicted GO
BP GO:0009226 nucleotide-sugar biosynthetic process IEP Predicted GO
BP GO:0009298 GDP-mannose biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Predicted GO
BP GO:0019673 GDP-mannose metabolic process IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 37 507
No external refs found!