1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc07g064130

Solyc07g064130


Description : Polyubiquitin (AHRD V3.3 *** UBI1P_NICSY)


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g064130
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
173723 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
228943 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
At3g09790 No alias Polyubiquitin 8 [Source:UniProtKB/Swiss-Prot;Acc:Q39256] 0.03 Orthogroups_2024-Update
Bradi3g04730 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi3g29730 No alias ubiquitin 6 0.02 Orthogroups_2024-Update
Brara.F02490.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Glyma.07G199900 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Glyma.17G042100 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
HORVU6Hr1G014970.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
MA_13121g0010 No alias (at5g03240 : 264.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.03 Orthogroups_2024-Update
Seita.1G078900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.1G282500.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
CC GO:0009538 photosystem I reaction center IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 3 74
IPR000626 Ubiquitin_dom 155 226
IPR000626 Ubiquitin_dom 231 302
IPR000626 Ubiquitin_dom 79 150
IPR000626 Ubiquitin_dom 383 454
IPR000626 Ubiquitin_dom 307 378
No external refs found!