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  5. LOC_Os04g40860

LOC_Os04g40860


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000353 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000353_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g40860
Cluster HCCA clusters: cluster_0143

Target Alias Description ECC score Gene Family Method Actions
63731 No alias Protein phosphatase 2A regulatory B subunit family protein 0.03 Orthogroups_2024-Update
At5g25510 No alias Serine/threonine protein phosphatase 2A 57 kDa... 0.03 Orthogroups_2024-Update
Glyma.06G073000 No alias Protein phosphatase 2A regulatory B subunit family protein 0.03 Orthogroups_2024-Update
PSME_00000510-RA No alias (at4g15415 : 688.0) B' regulatory subunit of PP2A... 0.03 Orthogroups_2024-Update
Seita.5G126100.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.03 Orthogroups_2024-Update
Seita.9G139200.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.03 Orthogroups_2024-Update
Sobic.009G225500.1 No alias regulatory component B1 of PP2A phosphatase complexes 0.02 Orthogroups_2024-Update
Solyc10g083920 No alias Serine/threonine protein phosphatase 2A regulatory... 0.03 Orthogroups_2024-Update
evm.model.tig00001265.17 No alias (at3g09880 : 535.0) Encodes B' regulatory subunit of... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEA InterProScan predictions
BP GO:0007165 signal transduction IEA InterProScan predictions
MF GO:0019888 protein phosphatase regulator activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
MF GO:0008168 methyltransferase activity IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002554 PP2A_B56 76 487
No external refs found!