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LOC_Os04g42140


Description : eukaryotic initiation factor iso-4F subunit p82-34, putative, expressed


Gene families : OG_42_0001957 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g42140
Cluster HCCA clusters: cluster_0072

Target Alias Description ECC score Gene Family Method Actions
Kfl00423_0050 kfl00423_0050_v1.1 (at5g57870 : 290.0) Encodes a putative eukaryotic... 0.01 Orthogroups_2024-Update
MA_207304g0010 No alias (at5g57870 : 271.0) Encodes a putative eukaryotic... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0004743 pyruvate kinase activity IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
MF GO:0030955 potassium ion binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
MF GO:0031420 alkali metal ion binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR003891 Initiation_fac_eIF4g_MI 629 739
IPR003890 MIF4G-like_typ-3 208 435
No external refs found!