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  5. LOC_Os04g42950

LOC_Os04g42950


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g42950
Cluster HCCA clusters: cluster_0126

Target Alias Description ECC score Gene Family Method Actions
At5g57620 No alias Transcription factor MYB36... 0.02 Orthogroups_2024-Update
Bradi2g62510 No alias myb domain protein 59 0.03 Orthogroups_2024-Update
Bradi3g49190 No alias myb domain protein 15 0.04 Orthogroups_2024-Update
Bradi4g23967 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Bradi4g30220 No alias myb domain protein 94 0.03 Orthogroups_2024-Update
Bradi5g15246 No alias myb domain protein 79 0.02 Orthogroups_2024-Update
Brara.B00599.1 No alias MYB class-R2R3 subgroup-8 transcription factor 0.03 Orthogroups_2024-Update
Brara.J01871.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G143274 No alias myb domain protein 61 0.02 Orthogroups_2024-Update
GRMZM2G395672 No alias myb domain protein 5 0.02 Orthogroups_2024-Update
Glyma.03G221700 No alias myb domain protein 2 0.02 Orthogroups_2024-Update
Glyma.12G105400 No alias myb domain protein 9 0.03 Orthogroups_2024-Update
HORVU3Hr1G079490.4 No alias MYB class-R2R3 subgroup-18 transcription factor 0.03 Orthogroups_2024-Update
HORVU6Hr1G060610.3 No alias MYB class-R2R3 subgroup-16 transcription factor &... 0.04 Orthogroups_2024-Update
LOC_Os02g40530 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os03g25550 No alias myb-like DNA-binding domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os06g14670 No alias ODORANT1, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00010776-RA No alias (at1g22640 : 177.0) MYB-type transcription factor (MYB3)... 0.02 Orthogroups_2024-Update
Potri.001G099800 No alias myb domain protein 103 0.02 Orthogroups_2024-Update
Potri.004G174400 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.004G215100 No alias myb domain protein 36 0.02 Orthogroups_2024-Update
Potri.008G128500 No alias myb domain protein 4 0.02 Orthogroups_2024-Update
Potri.012G080400 No alias myb domain protein 66 0.03 Orthogroups_2024-Update
Potri.013G130900 No alias myb domain protein 97 0.02 Orthogroups_2024-Update
Potri.015G046200 No alias myb domain protein 116 0.03 Orthogroups_2024-Update
Potri.019G045900 No alias myb domain protein 60 0.03 Orthogroups_2024-Update
Seita.2G286400.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G063000.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
Seita.6G154200.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Seita.7G179800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.001G391500.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G087600.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 78 122
IPR001005 SANT/Myb 25 72
No external refs found!