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  5. LOC_Os04g42980

LOC_Os04g42980


Description : zinc finger family protein, putative, expressed


Gene families : OG_42_0000384 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000384_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g42980
Cluster HCCA clusters: cluster_0117

Target Alias Description ECC score Gene Family Method Actions
MA_37441g0010 No alias (at5g60710 : 272.0) Zinc finger (C3HC4-type RING finger)... 0.03 Orthogroups_2024-Update
Sobic.001G226800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.001G508466.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sopen00g011380 No alias von Willebrand factor type A domain 0.05 Orthogroups_2024-Update
Sopen05g034550 No alias von Willebrand factor type A domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
InterPro domains Description Start Stop
IPR032838 Vwaint_dom 622 693
IPR002035 VWF_A 275 455
IPR001841 Znf_RING 93 122
No external refs found!