Solyc07g064490

Description : CRS2-associated factor 1 (AHRD V3.3 *** A0A072THI3_MEDTR)

Gene families : OG_42_0001286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001286_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc07g064490
Cluster	HCCA clusters: Cluster_80

Target	Alias	Description	ECC score	Gene Family Method	Actions
Glyma.16G024800	No alias	RNA-binding CRS1 / YhbY (CRM) domain-containing protein	0.03	Orthogroups_2024-Update
LOC_Os01g21990	No alias	CRS2-associated factor 2, chloroplast precursor,...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0001871	pattern binding	IEP	Predicted GO
BP	GO:0016567	protein ubiquitination	IEP	Predicted GO
MF	GO:0030247	polysaccharide binding	IEP	Predicted GO
BP	GO:0032446	protein modification by small protein conjugation	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	273	356
IPR001890	RNA-binding_CRM	153	238

External Links

No external refs found!