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  5. LOC_Os04g44780

LOC_Os04g44780


Description : beta-expansin precursor, putative, expressed


Gene families : OG_42_0000145 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000145_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g44780
Cluster HCCA clusters: cluster_0028

Target Alias Description ECC score Gene Family Method Actions
Bradi1g78350 No alias expansin B2 0.03 Orthogroups_2024-Update
PSME_00039911-RA No alias (at2g20750 : 117.0) member of BETA-EXPANSINS. Naming... 0.02 Orthogroups_2024-Update
Seita.1G260700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0018580 nitronate monooxygenase activity IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 87 153
No external refs found!