LOC_Os04g45010

Description : OsPLIM2b - LIM domain protein, putative actin-binding protein and transcription factor, expressed

Gene families : OG_42_0000555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g45010
Cluster	HCCA clusters: cluster_0024

Target	Alias	Description	ECC score	Gene Family Method
Glyma.06G185000	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
Potri.003G124300	No alias	GATA type zinc finger transcription factor family protein	0.02	Orthogroups_2024-Update
Seita.1G250500.1	No alias	LIM-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.008G110200.1	No alias	LIM-type transcription factor	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
BP	GO:0000724	double-strand break repair via homologous recombination	IEP	Predicted GO
BP	GO:0000725	recombinational repair	IEP	Predicted GO
MF	GO:0004827	proline-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006302	double-strand break repair	IEP	Predicted GO
BP	GO:0006310	DNA recombination	IEP	Predicted GO
BP	GO:0006433	prolyl-tRNA aminoacylation	IEP	Predicted GO
MF	GO:0008374	O-acyltransferase activity	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001781	Znf_LIM	10	65
IPR001781	Znf_LIM	105	159

External Links

No external refs found!