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LOC_Os04g45040


Description : DEAD-box ATP-dependent RNA helicase, putative, expressed


Gene families : OG_42_0002506 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002506_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g45040
Cluster HCCA clusters: cluster_0019


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0001671 ATPase activator activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 149 313
IPR001650 Helicase_C 350 456
No external refs found!