LOC_Os04g46220

Description : ethylene-responsive transcription factor, putative, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g46220
Cluster	HCCA clusters: cluster_0053

Target	Alias	Description	ECC score	Gene Family Method
At1g28160	No alias	Ethylene-responsive transcription factor ERF087...	0.03	Orthogroups_2024-Update
At5g67190	No alias	Ethylene-responsive transcription factor ERF010...	0.02	Orthogroups_2024-Update
Bradi1g04110	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Brara.A00881.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.F00821.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.G02403.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Brara.G02420.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Brara.H00930.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.I05105.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Glyma.16G040000	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G024300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.17G216100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU3Hr1G026970.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU4Hr1G077280.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
HORVU6Hr1G062380.3	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
HORVU7Hr1G099670.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_10274g0010	No alias	(at5g13330 : 108.0) encodes a member of the ERF...	0.02	Orthogroups_2024-Update
MA_10431529g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_9786598g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
Mp5g12480.1	No alias	Ethylene-responsive transcription factor ERF073...	0.02	Orthogroups_2024-Update
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Orthogroups_2024-Update
PSME_00005183-RA	No alias	(at5g47220 : 92.8) Encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
PSME_00046052-RA	No alias	(at1g19210 : 89.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
Potri.001G069300	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.002G201600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G186300	No alias	DORNROSCHEN-like	0.03	Orthogroups_2024-Update
Potri.012G108500	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.013G158500	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Potri.017G087800	No alias	related to AP2 11	0.02	Orthogroups_2024-Update
Potri.T050600	No alias	ethylene response factor 1	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.1G330800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.1G341100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.2G276200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.3G289200.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
MF	GO:0004499	N,N-dimethylaniline monooxygenase activity	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	Predicted GO
BP	GO:0010109	regulation of photosynthesis	IEP	Predicted GO
BP	GO:0010207	photosystem II assembly	IEP	Predicted GO
MF	GO:0010242	oxygen evolving activity	IEP	Predicted GO
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	Predicted GO
MF	GO:0016709	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	IEP	Predicted GO
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0042548	regulation of photosynthesis, light reaction	IEP	Predicted GO
BP	GO:0042549	photosystem II stabilization	IEP	Predicted GO
BP	GO:0043467	regulation of generation of precursor metabolites and energy	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Predicted GO
MF	GO:0050661	NADP binding	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO
CC	GO:1990204	oxidoreductase complex	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	152	202

External Links

No external refs found!

LOC_Os04g46220

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation