LOC_Os04g46250


Description : AP2 domain containing protein, expressed


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g46250
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
A4A49_03202 No alias ethylene-responsive transcription factor erf053 0.03 Orthogroups_2024-Update
At1g50640 No alias Uncharacterized protein At1g50640 (Fragment)... 0.02 Orthogroups_2024-Update
At2g20880 No alias Ethylene-responsive transcription factor ERF053... 0.02 Orthogroups_2024-Update
At3g23230 No alias Ethylene-responsive transcription factor ERF098... 0.02 Orthogroups_2024-Update
Glyma.03G112100 No alias ethylene-responsive element binding factor 13 0.02 Orthogroups_2024-Update
Glyma.16G164800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
PSME_00007285-RA No alias (at5g50080 : 84.0) encodes a member of the ERF (ethylene... 0.02 Orthogroups_2024-Update
PSME_00034722-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.003G150800 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Pp1s15_186V6 No alias transcriptional factor 0.01 Orthogroups_2024-Update
Seita.6G227100.1 No alias subgroup ERF-X transcription factor 0.02 Orthogroups_2024-Update
Sobic.001G531100.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 138 188
No external refs found!