LOC_Os04g46410

Description : AP2 domain containing protein, expressed

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g46410
Cluster	HCCA clusters: cluster_0008

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36962	No alias	ethylene-responsive transcription factor erf003	0.02	Orthogroups_2024-Update
At3g50260	No alias	Ethylene-responsive transcription factor ERF011...	0.02	Orthogroups_2024-Update
At5g13910	No alias	LEP [Source:UniProtKB/TrEMBL;Acc:A0A178UQP2]	0.02	Orthogroups_2024-Update
Brara.C03783.1	No alias	subgroup ERF-VIII transcription factor	0.02	Orthogroups_2024-Update
Brara.I00546.1	No alias	cutin and suberin biosynthesis transcription factor...	0.02	Orthogroups_2024-Update
GRMZM5G852704	No alias	related to AP2 4	0.02	Orthogroups_2024-Update
Glyma.05G049800	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.05G179900	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
LOC_Os10g38000	No alias	dehydration-responsive element-binding protein,...	0.03	Orthogroups_2024-Update
MA_9304g0020	No alias	(at1g28360 : 87.4) encodes a member of the ERF (ethylene...	0.02	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.01	Orthogroups_2024-Update
Pp1s13_457V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Sobic.006G184700.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Solyc03g118190	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	Predicted GO
BP	GO:0000723	telomere maintenance	IEP	Predicted GO
MF	GO:0003678	DNA helicase activity	IEP	Predicted GO
MF	GO:0004386	helicase activity	IEP	Predicted GO
BP	GO:0006996	organelle organization	IEP	Predicted GO
BP	GO:0032200	telomere organization	IEP	Predicted GO
BP	GO:0051276	chromosome organization	IEP	Predicted GO
BP	GO:0060249	anatomical structure homeostasis	IEP	Predicted GO
MF	GO:0140097	catalytic activity, acting on DNA	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	63	112

External Links

No external refs found!