LOC_Os04g46580

Description : OsSPL7 - SBP-box gene family member, expressed

Gene families : OG_42_0000135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000135_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g46580
Cluster	HCCA clusters: cluster_0141

Target	Alias	Description	ECC score	Gene Family Method
A4A49_18444	No alias	squamosa promoter-binding-like protein 5	0.03	Orthogroups_2024-Update
A4A49_27951	No alias	squamosa promoter-binding-like protein 8	0.02	Orthogroups_2024-Update
Brara.G01764.1	No alias	SBP-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I03020.1	No alias	SBP-type transcription factor	0.02	Orthogroups_2024-Update
Cre07.g345050	No alias	squamosa promoter binding protein-like 10	0.02	Orthogroups_2024-Update
GRMZM5G878561	No alias	Squamosa promoter-binding protein-like (SBP domain)...	0.02	Orthogroups_2024-Update
Glyma.02G177500	No alias	squamosa promoter binding protein-like 9	0.02	Orthogroups_2024-Update
Glyma.13G274900	No alias	squamosa promoter-binding protein-like 12	0.03	Orthogroups_2024-Update
MA_47367g0010	No alias	(at1g02065 : 173.0) Encodes an SBP-box gene, a member of...	0.05	Orthogroups_2024-Update
Pp1s194_61V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Pp1s337_52V6	No alias	squamosa promoter-binding	0.02	Orthogroups_2024-Update
Solyc03g114850	No alias	Squamosa promoter binding protein 6a	0.03	Orthogroups_2024-Update
Solyc05g012040	No alias	Squamosa promoter binding protein 6b	0.02	Orthogroups_2024-Update
Solyc07g053810	No alias	Squamosa promoter binding protein 4	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0008037	cell recognition	IEP	Predicted GO
MF	GO:0008173	RNA methyltransferase activity	IEP	Predicted GO
BP	GO:0022414	reproductive process	IEP	Predicted GO
BP	GO:0048544	recognition of pollen	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	108	181

External Links

No external refs found!