LOC_Os04g46660

Description : cyclin, putative, expressed

Gene families : OG_42_0000447 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000447_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g46660
Cluster	HCCA clusters: cluster_0092

Target	Alias	Description	ECC score	Gene Family Method
At3g60550	No alias	Cyclin-U2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q9M205]	0.03	Orthogroups_2024-Update
Glyma.09G245400	No alias	cyclin p4;1	0.04	Orthogroups_2024-Update
Glyma.11G166337	No alias	cyclin p3;1	0.02	Orthogroups_2024-Update
Glyma.13G306600	No alias	cyclin p2;1	0.03	Orthogroups_2024-Update
MA_92019g0010	No alias	(at3g60550 : 224.0) cyclin p3;2 (CYCP3;2); CONTAINS...	0.02	Orthogroups_2024-Update
MA_92793g0010	No alias	(at2g45080 : 206.0) cyclin p3;1 (cycp3;1); CONTAINS...	0.02	Orthogroups_2024-Update
Mp7g06850.1	No alias	cyclin (CYCP)	0.04	Orthogroups_2024-Update
PSME_00022193-RA	No alias	(at3g60550 : 201.0) cyclin p3;2 (CYCP3;2); CONTAINS...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEA	InterProScan predictions
BP	GO:0001932	regulation of protein phosphorylation	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0019220	regulation of phosphate metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0019899	enzyme binding	None	Extended
MF	GO:0019900	kinase binding	None	Extended
MF	GO:0019901	protein kinase binding	IEA	InterProScan predictions
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0032268	regulation of cellular protein metabolic process	None	Extended
BP	GO:0042325	regulation of phosphorylation	None	Extended
BP	GO:0043549	regulation of kinase activity	None	Extended
BP	GO:0045859	regulation of protein kinase activity	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051174	regulation of phosphorus metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0071900	regulation of protein serine/threonine kinase activity	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004096	catalase activity	IEP	Predicted GO
BP	GO:0006914	autophagy	IEP	Predicted GO
MF	GO:0008107	galactoside 2-alpha-L-fucosyltransferase activity	IEP	Predicted GO
MF	GO:0008417	fucosyltransferase activity	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
MF	GO:0031127	alpha-(1,2)-fucosyltransferase activity	IEP	Predicted GO
BP	GO:0042546	cell wall biogenesis	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
MF	GO:0051539	4 iron, 4 sulfur cluster binding	IEP	Predicted GO
BP	GO:0061919	process utilizing autophagic mechanism	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013922	Cyclin_PHO80-like	55	164

External Links

No external refs found!

LOC_Os04g46660

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation