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  5. LOC_Os04g46780

LOC_Os04g46780


Description : MSP domain containing protein, expressed


Gene families : OG_42_0000404 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g46780
Cluster HCCA clusters: cluster_0063

Target Alias Description ECC score Gene Family Method Actions
A4A49_37516 No alias vesicle-associated protein 1-2 0.02 Orthogroups_2024-Update
Bradi3g50040 No alias plant VAP homolog 12 0.04 Orthogroups_2024-Update
Brara.F00558.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
GRMZM5G876973 No alias Plant VAMP (vesicle-associated membrane protein) family protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G060760.3 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
HORVU6Hr1G062050.9 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Sobic.004G293000.1 No alias contact site protein (VAP27) of... 0.02 Orthogroups_2024-Update
Sobic.004G298200.1 No alias contact site protein (VAP27) of... 0.03 Orthogroups_2024-Update
Solyc01g090990 No alias vesicle-associated membrane protein 0.02 Orthogroups_2024-Update
Solyc08g078690 No alias putative vesicle-associated protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004096 catalase activity IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004197 cysteine-type endopeptidase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
CC GO:0005737 cytoplasm IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0010564 regulation of cell cycle process IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0032465 regulation of cytokinesis IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032954 regulation of cytokinetic process IEP Predicted GO
BP GO:0032955 regulation of division septum assembly IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044087 regulation of cellular component biogenesis IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051128 regulation of cellular component organization IEP Predicted GO
BP GO:0051301 cell division IEP Predicted GO
BP GO:0051302 regulation of cell division IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901891 regulation of cell septum assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR000535 MSP_dom 6 105
No external refs found!