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  5. LOC_Os04g47220

LOC_Os04g47220


Description : aquaporin protein, putative, expressed


Gene families : OG_42_0000132 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g47220
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
A4A49_28516 No alias aquaporin pip2-7 0.03 Orthogroups_2024-Update
Bradi3g18460 No alias plasma membrane intrinsic protein 2;5 0.03 Orthogroups_2024-Update
Brara.D02777.1 No alias plasma membrane intrinsic protein *(PIP) 0.02 Orthogroups_2024-Update
Glyma.05G208700 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Glyma.05G208941 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Glyma.12G172500 No alias plasma membrane intrinsic protein 2 0.02 Orthogroups_2024-Update
LOC_Os03g64330 No alias aquaporin protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_93945g0010 No alias (q6k215|pip22_orysa : 293.0) Probable aquaporin PIP2.2... 0.03 Orthogroups_2024-Update
Mp4g04440.1 No alias plasma membrane intrinsic protein (PIP) 0.02 Orthogroups_2024-Update
Potri.008G065600 No alias plasma membrane intrinsic protein 1;4 0.03 Orthogroups_2024-Update
Potri.016G089500 No alias plasma membrane intrinsic protein 2 0.02 Orthogroups_2024-Update
Potri.016G113300 No alias plasma membrane intrinsic protein 1;4 0.02 Orthogroups_2024-Update
Pp1s1_535V6 No alias plasma membrane aquaporin 0.02 Orthogroups_2024-Update
Solyc05g055990 No alias plasma membrane intrinsic protein 2.12 0.02 Orthogroups_2024-Update
Sopen09g002620 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update
Sopen10g033580 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0005666 RNA polymerase III complex IEP Predicted GO
BP GO:0006383 transcription by RNA polymerase III IEP Predicted GO
MF GO:0015298 solute:cation antiporter activity IEP Predicted GO
MF GO:0015299 solute:proton antiporter activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 46 275
No external refs found!