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  5. LOC_Os04g49380

LOC_Os04g49380


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g49380
Cluster HCCA clusters: cluster_0121

Target Alias Description ECC score Gene Family Method Actions
Bradi1g72196 No alias FAR1-related sequence 5 0.01 Orthogroups_2024-Update
Glyma.10G259000 No alias FRS (FAR1 Related Sequences) transcription factor family 0.02 Orthogroups_2024-Update
LOC_Os04g52560 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g17300 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Sobic.010G181200.1 No alias FRS/FRF-type transcription factor 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004330 FAR1_DNA_bnd_dom 473 570
IPR007527 Znf_SWIM 885 920
No external refs found!