LOC_Os04g49520

Description : pentatricopeptide repeat protein PPR868-14, putative, expressed

Gene families : OG_42_0011308 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0011308_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g49520
Cluster	HCCA clusters: cluster_0121

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004150	dihydroneopterin aldolase activity	IEP	Predicted GO
BP	GO:0006575	cellular modified amino acid metabolic process	IEP	Predicted GO
BP	GO:0006760	folic acid-containing compound metabolic process	IEP	Predicted GO
MF	GO:0016832	aldehyde-lyase activity	IEP	Predicted GO
BP	GO:0042558	pteridine-containing compound metabolic process	IEP	Predicted GO
BP	GO:0043603	cellular amide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	234	282
IPR002885	Pentatricopeptide_repeat	467	515
IPR002885	Pentatricopeptide_repeat	568	616
IPR002885	Pentatricopeptide_repeat	68	97
IPR002885	Pentatricopeptide_repeat	104	132
IPR002885	Pentatricopeptide_repeat	438	465
IPR002885	Pentatricopeptide_repeat	309	335
IPR002885	Pentatricopeptide_repeat	337	363
IPR002885	Pentatricopeptide_repeat	643	668
IPR002885	Pentatricopeptide_repeat	543	565
IPR002885	Pentatricopeptide_repeat	409	437
IPR032867	DYW_dom	742	855

External Links

No external refs found!