LOC_Os04g49900

Description : ABC transporter family protein, putative, expressed

Gene families : OG_42_0000076 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000076_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Oryza release: LOC_Os04g49900
Cluster	HCCA clusters: cluster_0010

Target	Alias	Description	ECC score	Gene Family Method
A4A49_29003	No alias	abc transporter c family member 10	0.02	Orthogroups_2024-Update
At3g13100	No alias	ABC transporter C family member 7...	0.02	Orthogroups_2024-Update
Bradi2g04577	No alias	multidrug resistance-associated protein 3	0.02	Orthogroups_2024-Update
Brara.E02801.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
GRMZM2G111903	No alias	multidrug resistance-associated protein 14	0.02	Orthogroups_2024-Update
Glyma.04G126500	No alias	multidrug resistance-associated protein 2	0.04	Orthogroups_2024-Update
Glyma.07G121900	No alias	multidrug resistance-associated protein 9	0.03	Orthogroups_2024-Update
Glyma.08G190700	No alias	multidrug resistance-associated protein 6	0.03	Orthogroups_2024-Update
Glyma.20G165000	No alias	multidrug resistance-associated protein 14	0.02	Orthogroups_2024-Update
HORVU7Hr1G088210.25	No alias	subfamily ABCC transporter	0.04	Orthogroups_2024-Update
Mp4g11950.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Mp4g15590.1	No alias	subfamily ABCC transporter	0.03	Orthogroups_2024-Update
Mp5g13190.1	No alias	subfamily ABCC transporter	0.02	Orthogroups_2024-Update
Potri.002G255800	No alias	multidrug resistance-associated protein 5	0.03	Orthogroups_2024-Update
Potri.003G197200	No alias	multidrug resistance-associated protein 3	0.02	Orthogroups_2024-Update
Pp1s142_27V6	No alias	multidrug resistance protein abc transporter family	0.03	Orthogroups_2024-Update
Seita.7G216700.1	No alias	subfamily ABCC transporter	0.04	Orthogroups_2024-Update
Sobic.003G160200.1	No alias	subfamily ABCC transporter	0.04	Orthogroups_2024-Update
Solyc08g006880	No alias	Multidrug resistance protein ABC transporter family...	0.02	Orthogroups_2024-Update
Solyc09g075020	No alias	Multidrug resistance protein ABC transporter family...	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
MF	GO:0008144	drug binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0015405	P-P-bond-hydrolysis-driven transmembrane transporter activity	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
CC	GO:0031224	intrinsic component of membrane	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042623	ATPase activity, coupled	None	Extended
MF	GO:0042626	ATPase activity, coupled to transmembrane movement of substances	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043492	ATPase activity, coupled to movement of substances	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004497	monooxygenase activity	IEP	Predicted GO
BP	GO:0005984	disaccharide metabolic process	IEP	Predicted GO
BP	GO:0005991	trehalose metabolic process	IEP	Predicted GO
BP	GO:0005992	trehalose biosynthetic process	IEP	Predicted GO
BP	GO:0006855	drug transmembrane transport	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0010277	chlorophyllide a oxygenase [overall] activity	IEP	Predicted GO
MF	GO:0015238	drug transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015297	antiporter activity	IEP	Predicted GO
BP	GO:0015893	drug transport	IEP	Predicted GO
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	Predicted GO
MF	GO:0016703	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	IEP	Predicted GO
BP	GO:0046351	disaccharide biosynthetic process	IEP	Predicted GO
MF	GO:0051537	2 iron, 2 sulfur cluster binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	783	1005
IPR011527	ABC1_TM_dom	120	367
IPR003439	ABC_transporter-like	1080	1228
IPR003439	ABC_transporter-like	446	580

External Links

No external refs found!

LOC_Os04g49900

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation