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  5. LOC_Os04g50060

LOC_Os04g50060


Description : GRAS family transcription factor domain containing protein, expressed


Gene families : OG_42_0000237 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000237_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g50060
Cluster HCCA clusters: cluster_0097

Target Alias Description ECC score Gene Family Method Actions
A4A49_26510 No alias scarecrow-like protein 9 0.02 Orthogroups_2024-Update
At2g29060 No alias Scarecrow-like protein 33... 0.03 Orthogroups_2024-Update
Bradi1g15123 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Bradi2g52227 No alias GRAS family transcription factor 0.03 Orthogroups_2024-Update
Bradi4g09190 No alias GRAS family transcription factor 0.02 Orthogroups_2024-Update
Brara.D01740.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.13G337300 No alias SCARECROW-like 14 0.03 Orthogroups_2024-Update
Glyma.13G337600 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
PSME_00034111-RA No alias (at2g37650 : 320.0) GRAS family transcription factor;... 0.03 Orthogroups_2024-Update
Potri.001G241700 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Potri.001G242000 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Potri.009G032900 No alias SCARECROW-like 14 0.02 Orthogroups_2024-Update
Seita.9G174900.1 No alias GRAS-type transcription factor 0.04 Orthogroups_2024-Update
Sobic.002G301800.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G230200.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Sobic.005G230900.1 No alias GRAS-type transcription factor 0.03 Orthogroups_2024-Update
Solyc09g010920 No alias GRAS family transcription factor (AHRD V3.3 *** A0A072U0I2_MEDTR) 0.02 Orthogroups_2024-Update
Sopen01g043700 No alias GRAS domain family 0.02 Orthogroups_2024-Update
Sopen06g033930 No alias GRAS domain family 0.02 Orthogroups_2024-Update
Sopen09g005640 No alias GRAS domain family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019899 enzyme binding IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR005202 TF_GRAS 262 634
No external refs found!