1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g50680

LOC_Os04g50680


Description : MYB family transcription factor, putative, expressed


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g50680
Cluster HCCA clusters: cluster_0120

Target Alias Description ECC score Gene Family Method Actions
At3g01140 No alias Myb domain protein 106 [Source:UniProtKB/TrEMBL;Acc:F4J2A8] 0.03 Orthogroups_2024-Update
At3g13540 No alias MYB5 [Source:UniProtKB/TrEMBL;Acc:A0A178VAR4] 0.02 Orthogroups_2024-Update
At3g28470 No alias Transcription factor MYB35... 0.03 Orthogroups_2024-Update
Bradi2g46770 No alias myb domain protein 87 0.02 Orthogroups_2024-Update
Brara.F00610.1 No alias MYB class-R2R3 subgroup-13 transcription factor 0.03 Orthogroups_2024-Update
Glyma.09G206200 No alias myb domain protein 39 0.03 Orthogroups_2024-Update
Glyma.13G302400 No alias MYB-like 102 0.03 Orthogroups_2024-Update
LOC_Os02g49986 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g48010 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os07g44090 No alias myb-related protein Hv33, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os08g43550 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_10435612g0010 No alias (at5g15310 : 300.0) Member of the R2R3 factor gene... 0.03 Orthogroups_2024-Update
MA_93127g0010 No alias (at4g38620 : 220.0) Encodes a R2R3 MYB protein which is... 0.02 Orthogroups_2024-Update
MA_9374017g0010 No alias (at3g02940 : 238.0) Encodes a putative transcription... 0.04 Orthogroups_2024-Update
MA_9483804g0010 No alias (at5g15310 : 299.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
PSME_00010958-RA No alias (at3g61250 : 283.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00021697-RA No alias (at5g15310 : 302.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
PSME_00051633-RA No alias (at3g61250 : 281.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update
Potri.011G125900 No alias MYB-like 102 0.02 Orthogroups_2024-Update
Potri.017G086300 No alias myb domain protein 16 0.02 Orthogroups_2024-Update
Pp1s284_57V6 No alias MDA7.17; myb family transcription factor [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Seita.1G281500.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
Seita.4G115200.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
Seita.5G087200.1 No alias MYB class-R2R3 subgroup-19/20 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G279100.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.02 Orthogroups_2024-Update
Sobic.002G385450.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 15 64
IPR001005 SANT/Myb 70 114
No external refs found!