LOC_Os04g52560


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000075 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g52560
Cluster HCCA clusters: cluster_0071

Target Alias Description ECC score Gene Family Method Actions
Glyma.04G193200 No alias FAR1-related sequence 5 0.03 Orthogroups_2024-Update
Glyma.07G224702 No alias FAR1-related sequence 6 0.03 Orthogroups_2024-Update
HORVU2Hr1G028930.4 No alias FRS/FRF-type transcription factor 0.02 Orthogroups_2024-Update
LOC_Os04g49380 No alias transposon protein, putative, unclassified, expressed 0.03 Orthogroups_2024-Update
Pp1s87_186V6 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001671 ATPase activator activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
MF GO:0005543 phospholipid binding IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Predicted GO
MF GO:0060590 ATPase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR018289 MULE_transposase_dom 380 474
IPR004330 FAR1_DNA_bnd_dom 200 283
No external refs found!