Solyc07g065360

Description : Pectinesterase (AHRD V3.3 *** K4CHL4_SOLLC)

Gene families : OG_42_0000087 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000087_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Solyc07g065360
Cluster	HCCA clusters: Cluster_64

Target	Alias	Description	ECC score	Gene Family Method
A4A49_28049	No alias	putative pectinesterase 8	0.02	Orthogroups_2024-Update
At2g36700	No alias	Putative pectinesterase 14...	0.03	Orthogroups_2024-Update
Brara.A02274.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Brara.B00244.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Glyma.01G066000	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
Glyma.01G066100	No alias	Pectin lyase-like superfamily protein	0.03	Orthogroups_2024-Update
HORVU7Hr1G076580.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
MA_62865g0010	No alias	(at2g36710 : 276.0) Pectin lyase-like superfamily...	0.06	Orthogroups_2024-Update
Mp5g03920.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Mp5g03930.1	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
PSME_00033773-RA	No alias	(at2g36710 : 272.0) Pectin lyase-like superfamily...	0.04	Orthogroups_2024-Update
PSME_00034460-RA	No alias	(at5g19730 : 230.0) Pectin lyase-like superfamily...	0.02	Orthogroups_2024-Update
Pp1s215_36V6	No alias	pectin methylesterase	0.03	Orthogroups_2024-Update
Pp1s67_6V6	No alias	pectin methylesterase	0.02	Orthogroups_2024-Update
Solyc12g098340	No alias	Pectinesterase (AHRD V3.3 *** K4DHK8_SOLLC)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
MF	GO:0030599	pectinesterase activity	IEA	InterProScan predictions
BP	GO:0042545	cell wall modification	IEA	InterProScan predictions
CC	GO:0044464	cell part	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
MF	GO:0052689	carboxylic ester hydrolase activity	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071555	cell wall organization	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0045735	nutrient reservoir activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000070	Pectinesterase_cat	58	350

External Links

No external refs found!