LOC_Os04g53700


Description : zinc finger protein, putative, expressed


Gene families : OG_42_0007656 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007656_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g53700
Cluster HCCA clusters: cluster_0027

Target Alias Description ECC score Gene Family Method Actions
168317 No alias histone-lysine N-methyltransferase ATXR2 0.02 Orthogroups_2024-Update
Cre01.g041100 No alias histone-lysine N-methyltransferase ATXR2 0.02 Orthogroups_2024-Update
GRMZM2G164277 No alias histone-lysine N-methyltransferase ATXR2 0.03 Orthogroups_2024-Update
Sobic.006G225400.1 No alias histone methyltransferase *(ATXR2) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
CC GO:0005759 mitochondrial matrix IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0016458 gene silencing IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0031047 gene silencing by RNA IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
InterPro domains Description Start Stop
IPR002893 Znf_MYND 222 249
IPR001214 SET_dom 101 485
No external refs found!