1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os04g54400

LOC_Os04g54400


Description : BTBN12 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed


Gene families : OG_42_0000067 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g54400
Cluster HCCA clusters: cluster_0102

Target Alias Description ECC score Gene Family Method Actions
231529 No alias Phototropic-responsive NPH3 family protein 0.04 Orthogroups_2024-Update
At4g31820 No alias BTB/POZ domain-containing protein NPY1... 0.02 Orthogroups_2024-Update
HORVU4Hr1G069760.10 No alias substrate adaptor *(NPY) of CUL3-BTB E3 ubiquitin ligase complex 0.02 Orthogroups_2024-Update
PSME_00021708-RA No alias (at5g66560 : 98.6) Phototropic-responsive NPH3 family... 0.03 Orthogroups_2024-Update
Potri.009G150500 No alias Phototropic-responsive NPH3 family protein 0.03 Orthogroups_2024-Update
Potri.014G133500 No alias Phototropic-responsive NPH3 family protein 0.02 Orthogroups_2024-Update
Pp1s96_183V6 No alias protein binding 0.02 Orthogroups_2024-Update
Sopen01g049440 No alias NPH3 family 0.02 Orthogroups_2024-Update
Sopen02g034770 No alias NPH3 family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004602 glutathione peroxidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:1990380 Lys48-specific deubiquitinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR027356 NPH3_dom 219 481
IPR000210 BTB/POZ_dom 29 119
No external refs found!