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  5. LOC_Os04g54810

LOC_Os04g54810


Description : beta-D-xylosidase, putative, expressed


Gene families : OG_42_0000397 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g54810
Cluster HCCA clusters: cluster_0053

Target Alias Description ECC score Gene Family Method Actions
80102 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
A4A49_10220 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.02 Orthogroups_2024-Update
A4A49_11510 No alias beta-xylosidasealpha-l-arabinofuranosidase 2 0.02 Orthogroups_2024-Update
At5g64570 No alias Beta-D-xylosidase 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9FLG1] 0.02 Orthogroups_2024-Update
Bradi3g59020 No alias Glycosyl hydrolase family protein 0.03 Orthogroups_2024-Update
Bradi4g20197 No alias Glycosyl hydrolase family protein 0.05 Orthogroups_2024-Update
Bradi5g23470 No alias beta-D-xylosidase 4 0.05 Orthogroups_2024-Update
Brara.E02235.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Brara.F02333.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Brara.F02936.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.02 Orthogroups_2024-Update
Brara.I00420.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Glyma.15G143700 No alias beta-xylosidase 1 0.02 Orthogroups_2024-Update
HORVU4Hr1G069100.2 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
LOC_Os11g19210 No alias beta-D-xylosidase, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00001080-RA No alias (at3g19620 : 885.0) Glycosyl hydrolase family protein;... 0.03 Orthogroups_2024-Update
PSME_00011213-RA No alias (at5g64570 : 986.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
PSME_00023147-RA No alias (at5g64570 : 870.0) Encodes a beta-d-xylosidase that... 0.02 Orthogroups_2024-Update
Seita.8G106400.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.05 Orthogroups_2024-Update
Sobic.005G110436.1 No alias bifunctional alpha-L-arabinofuranosidase and... 0.03 Orthogroups_2024-Update
Solyc02g091680 No alias Beta-D-xylosidase (AHRD V3.3 *** A9YWR3_MEDTR) 0.02 Orthogroups_2024-Update
Solyc11g044910 No alias Beta-D-xylosidase family protein (AHRD V3.3 *** B9HWX2_POPTR) 0.02 Orthogroups_2024-Update
Sopen01g047480 No alias Glycosyl hydrolase family 3 N terminal domain 0.02 Orthogroups_2024-Update
Sopen02g036290 No alias Glycosyl hydrolase family 3 N terminal domain 0.02 Orthogroups_2024-Update
Sopen10g016980 No alias Glycosyl hydrolase family 3 N terminal domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004190 aspartic-type endopeptidase activity IEP Predicted GO
MF GO:0004367 glycerol-3-phosphate dehydrogenase [NAD+] activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0005976 polysaccharide metabolic process IEP Predicted GO
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0052646 alditol phosphate metabolic process IEP Predicted GO
MF GO:0070001 aspartic-type peptidase activity IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR002772 Glyco_hydro_3_C 399 629
IPR026891 Fn3-like 690 756
IPR001764 Glyco_hydro_3_N 112 353
No external refs found!