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  5. LOC_Os04g55210

LOC_Os04g55210


Description : chloride channel protein, putative, expressed


Gene families : OG_42_0000631 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000631_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g55210
Cluster HCCA clusters: cluster_0040

Target Alias Description ECC score Gene Family Method Actions
Mp3g25240.1 No alias anion channel / anion:proton antiporter (CLC) 0.02 Orthogroups_2024-Update
Seita.5G399700.1 No alias anion channel / anion 0.04 Orthogroups_2024-Update
Solyc09g075800 No alias Chloride channel protein (AHRD V3.3 *-* K4CVF7_SOLLC) 0.03 Orthogroups_2024-Update
evm.model.contig_2068.23 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005247 voltage-gated chloride channel activity IEA InterProScan predictions
BP GO:0006821 chloride transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Predicted GO
BP GO:0006308 DNA catabolic process IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0009793 embryo development ending in seed dormancy IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001807 Cl-channel_volt-gated 166 580
IPR000644 CBS_dom 728 776
No external refs found!