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  5. LOC_Os04g55770

LOC_Os04g55770


Description : expressed protein


Gene families : OG_42_0000205 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g55770
Cluster HCCA clusters: cluster_0024

Target Alias Description ECC score Gene Family Method Actions
Bradi1g74250 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g36546 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Bradi3g38590 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
HORVU0Hr1G013110.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os04g53520 No alias expressed protein 0.03 Orthogroups_2024-Update
Seita.1G197700.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.4G249800.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.8G136600.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.007G017800.1 No alias Unknown function 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
InterPro domains Description Start Stop
IPR024752 Myb/SANT-like_dom 17 110
IPR006566 FBD 575 618
No external refs found!