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  5. Solyc07g065630

Solyc07g065630


Description : E3 ubiquitin-protein ligase UPL1 (AHRD V3.3 *** W9QFS0_9ROSA)


Gene families : OG_42_0001888 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc07g065630
Cluster HCCA clusters: Cluster_242

Target Alias Description ECC score Gene Family Method Actions
154179 No alias ubiquitin-protein ligase 1 0.04 Orthogroups_2024-Update
At1g70320 No alias E3 ubiquitin-protein ligase UPL2... 0.02 Orthogroups_2024-Update
Glyma.05G133100 No alias ubiquitin-protein ligase 1 0.03 Orthogroups_2024-Update
LOC_Os12g24080 No alias HECT-domain domain containing protein, expressed 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008375 acetylglucosaminyltransferase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0016987 sigma factor activity IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR015940 UBA 1295 1332
IPR000569 HECT_dom 3446 3756
IPR025527 DUF4414 2648 2743
IPR010309 E3_Ub_ligase_DUF908 207 357
IPR010309 E3_Ub_ligase_DUF908 85 207
IPR010314 E3_Ub_ligase_DUF913 417 788
No external refs found!