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  5. LOC_Os04g56920

LOC_Os04g56920


Description : glycosyl hydrolases, putative, expressed


Gene families : OG_42_0000217 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000217_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g56920
Cluster HCCA clusters: cluster_0114

Target Alias Description ECC score Gene Family Method Actions
A4A49_39641 No alias beta-fructofuranosidase, insoluble isoenzyme 1 0.03 Orthogroups_2024-Update
At1g62660 No alias Acid beta-fructofuranosidase 3, vacuolar... 0.02 Orthogroups_2024-Update
Brara.I05129.1 No alias vacuolar acid beta-fructofuranosidase *(VIN) & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Glyma.20G028800 No alias cell wall invertase 4 0.03 Orthogroups_2024-Update
MA_43229g0010 No alias (p26792|inv1_dauca : 577.0) Beta-fructofuranosidase,... 0.02 Orthogroups_2024-Update
Seita.3G028300.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.03 Orthogroups_2024-Update
Seita.7G091700.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.02 Orthogroups_2024-Update
Seita.9G102500.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.03 Orthogroups_2024-Update
Sobic.006G070298.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.02 Orthogroups_2024-Update
Sobic.006G160700.2 No alias vacuolar acid beta-fructofuranosidase *(VIN) & EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.006G255400.1 No alias cell wall acid beta-fructofuranosidase *(CWIN) & EC_3.2... 0.02 Orthogroups_2024-Update
Solyc10g085650 No alias Cell-wall invertase (AHRD V3.3 *** Q8LRN9_SOLLC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003860 3-hydroxyisobutyryl-CoA hydrolase activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
MF GO:0016289 CoA hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
InterPro domains Description Start Stop
IPR013189 Glyco_hydro_32_C 374 570
IPR013148 Glyco_hydro_32_N 42 371
No external refs found!