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  5. LOC_Os04g57930

LOC_Os04g57930


Description : thioredoxin, putative, expressed


Gene families : OG_42_0000653 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000653_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g57930
Cluster HCCA clusters: cluster_0127

Target Alias Description ECC score Gene Family Method Actions
Bradi4g40800 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Cre01.g052250 No alias thioredoxin X 0.02 Orthogroups_2024-Update
HORVU5Hr1G033050.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
HORVU5Hr1G033060.1 No alias thioredoxin *(TRX-M) 0.03 Orthogroups_2024-Update
Potri.005G186800 No alias thioredoxin M-type 4 0.04 Orthogroups_2024-Update
Potri.011G120500 No alias thioredoxin M-type 4 0.03 Orthogroups_2024-Update
Pp1s317_45V6 No alias thioredoxin m - 0.02 Orthogroups_2024-Update
Seita.3G016700.1 No alias X-type thioredoxin *(Trx-X) 0.02 Orthogroups_2024-Update
Sobic.006G265900.1 No alias X-type thioredoxin *(Trx-X) 0.03 Orthogroups_2024-Update
Solyc10g008390 No alias Thioredoxin (AHRD V3.3 *** A7LNX7_9CARY) 0.03 Orthogroups_2024-Update
Sopen07g031380 No alias Thioredoxin 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0045454 cell redox homeostasis IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 73 170
No external refs found!