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  5. LOC_Os04g58020

LOC_Os04g58020


Description : MYB_Al protein, putative, expressed


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58020
Cluster HCCA clusters: cluster_0020

Target Alias Description ECC score Gene Family Method Actions
A4A49_23978 No alias transcription factor myb1r1 0.03 Orthogroups_2024-Update
At5g47390 No alias Transcription factor KUA1... 0.02 Orthogroups_2024-Update
Bradi5g26110 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Brara.B01892.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.B02141.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.B03763.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.05 Orthogroups_2024-Update
Brara.C03606.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.D02327.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.E02518.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Brara.G03304.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Brara.J02420.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.07G146300 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.08G029400 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.08G290100 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G191700 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.20G060250 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G018970.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
HORVU1Hr1G073300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
HORVU3Hr1G010600.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
HORVU3Hr1G019480.2 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
HORVU7Hr1G072890.7 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
LOC_Os01g04930 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g51160 No alias Myb transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g04840 No alias MYB family transcription factor, putative, expressed 0.04 Orthogroups_2024-Update
MA_40234g0010 No alias (at5g47390 : 218.0) myb-like transcription factor family... 0.03 Orthogroups_2024-Update
PSME_00003776-RA No alias (at5g47390 : 201.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
PSME_00026612-RA No alias (at5g47390 : 221.0) myb-like transcription factor family... 0.02 Orthogroups_2024-Update
Potri.003G079500 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.007G076200 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.3G016200.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.5G135900.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Seita.6G065500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.003G034300.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Sobic.009G157500.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Solyc02g082390 No alias LOW QUALITY:MYB-like transcription factor family protein... 0.02 Orthogroups_2024-Update
Sopen06g033150 No alias Myb-like DNA-binding domain 0.02 Orthogroups_2024-Update
Sopen12g003730 No alias hypothetical protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0004560 alpha-L-fucosidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004834 tryptophan synthase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005996 monosaccharide metabolic process IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0015928 fucosidase activity IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019318 hexose metabolic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050661 NADP binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051186 cofactor metabolic process IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 274 318
No external refs found!