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  5. LOC_Os04g58050

LOC_Os04g58050


Description : expressed protein


Gene families : OG_42_0002204 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58050
Cluster HCCA clusters: cluster_0062

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g70290 No alias expressed protein 0.04 Orthogroups_2024-Update
LOC_Os03g05370 No alias expressed protein 0.03 Orthogroups_2024-Update
LOC_Os03g05380 No alias expressed protein 0.04 Orthogroups_2024-Update
Seita.2G181000.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004556 alpha-amylase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012871 DUF1668_ORYSA 2 313
No external refs found!