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  5. LOC_Os04g58160

LOC_Os04g58160


Description : fiber protein Fb34, putative, expressed


Gene families : OG_42_0000690 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000690_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58160
Cluster HCCA clusters: cluster_0035

Target Alias Description ECC score Gene Family Method Actions
LOC_Os07g27810 No alias fiber protein Fb34, putative, expressed 0.03 Orthogroups_2024-Update
Pp1s161_107V6 No alias T7P1.24; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s217_49V6 No alias F13B4.21; expressed protein [Arabidopsis thaliana] 0.01 Orthogroups_2024-Update
Pp1s37_79V6 No alias F14G24.18; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Pp1s39_388V6 No alias F14G24.18; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Solyc05g009330 No alias Fiber protein Fb34 (AHRD V3.3 *** G7JX88_MEDTR) 0.02 Orthogroups_2024-Update
Sopen02g023490 No alias Protein of unknown function (DUF1218) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005244 voltage-gated ion channel activity IEP Predicted GO
MF GO:0005247 voltage-gated chloride channel activity IEP Predicted GO
MF GO:0005253 anion channel activity IEP Predicted GO
MF GO:0005254 chloride channel activity IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006821 chloride transport IEP Predicted GO
BP GO:0006979 response to oxidative stress IEP Predicted GO
MF GO:0008308 voltage-gated anion channel activity IEP Predicted GO
MF GO:0008509 anion transmembrane transporter activity IEP Predicted GO
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Predicted GO
MF GO:0015108 chloride transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
BP GO:0015698 inorganic anion transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0022832 voltage-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR009606 DUF1218 60 154
No external refs found!