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  5. LOC_Os04g58280

LOC_Os04g58280


Description : stem-specific protein TSJT1, putative, expressed


Gene families : OG_42_0000532 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000532_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os04g58280
Cluster HCCA clusters: cluster_0020

Target Alias Description ECC score Gene Family Method Actions
A4A49_41896 No alias stem-specific protein tsjt1 0.03 Orthogroups_2024-Update
At3g15450 No alias AT3g15450/MJK13_11 [Source:UniProtKB/TrEMBL;Acc:Q9LE80] 0.02 Orthogroups_2024-Update
At5g19140 No alias Aluminum induced protein with YGL and LRDR motifs... 0.04 Orthogroups_2024-Update
At5g43830 No alias Aluminum induced protein with YGL and LRDR motifs... 0.03 Orthogroups_2024-Update
Brara.A01715.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C00870.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.C03893.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I01799.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.13G207800 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Glyma.13G242100 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
Glyma.17G016300 No alias Aluminium induced protein with YGL and LRDR motifs 0.02 Orthogroups_2024-Update
HORVU2Hr1G118550.2 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G040970.5 No alias Unknown function 0.04 Orthogroups_2024-Update
MA_12061g0010 No alias (at5g43830 : 289.0) Aluminium induced protein with YGL... 0.03 Orthogroups_2024-Update
Mp7g03680.1 No alias Stem-specific protein TSJT1 OS=Nicotiana tabacum... 0.02 Orthogroups_2024-Update
PSME_00000821-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00027947-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Pp1s257_73V6 No alias F5N5.2; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.005G034000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g079880 No alias Stem-specific TSJT1 (AHRD V3.3 *** A0A0B0MRD0_GOSAR) 0.03 Orthogroups_2024-Update
Solyc02g078500 No alias Stem-specific protein TSJT1, putative (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Predicted GO
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0003997 acyl-CoA oxidase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005102 signaling receptor binding IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006635 fatty acid beta-oxidation IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008083 growth factor activity IEP Predicted GO
BP GO:0008283 cell proliferation IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009062 fatty acid catabolic process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016051 carbohydrate biosynthetic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0019395 fatty acid oxidation IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
BP GO:0030258 lipid modification IEP Predicted GO
MF GO:0030545 receptor regulator activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0034440 lipid oxidation IEP Predicted GO
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
BP GO:0042126 nitrate metabolic process IEP Predicted GO
BP GO:0042128 nitrate assimilation IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044242 cellular lipid catabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0048018 receptor ligand activity IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0072329 monocarboxylic acid catabolic process IEP Predicted GO
BP GO:2001057 reactive nitrogen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR024286 DUF3700 2 152
No external refs found!