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  5. LOC_Os05g01350

LOC_Os05g01350


Description : retrotransposon protein, putative, unclassified, expressed


Gene families : OG_42_0000265 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g01350
Cluster HCCA clusters: cluster_0061

Target Alias Description ECC score Gene Family Method Actions
A4A49_38136 No alias formin-like protein 11 0.02 Orthogroups_2024-Update
Bradi3g36510 No alias formin homology 1 0.02 Orthogroups_2024-Update
Potri.005G026300 No alias Actin-binding FH2 (formin homology 2) family protein 0.02 Orthogroups_2024-Update
Potri.013G017900 No alias formin homolog 6 0.03 Orthogroups_2024-Update
Seita.9G499700.1 No alias group-I formin actin filament elongation factor 0.02 Orthogroups_2024-Update
Sobic.009G002200.1 No alias group-I formin actin filament elongation factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR015425 FH2_Formin 453 797
No external refs found!