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  5. LOC_Os05g02820

LOC_Os05g02820


Description : protein transport protein-related, putative, expressed


Gene families : OG_42_0001849 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001849_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g02820
Cluster HCCA clusters: cluster_0107

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G009200 No alias Plant protein of unknown function (DUF827) 0.02 Orthogroups_2024-Update
HORVU5Hr1G021910.1 No alias Unknown function 0.02 Orthogroups_2024-Update
PSME_00019300-RA No alias (at5g16730 : 190.0) LOCATED IN: chloroplast; EXPRESSED... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004175 endopeptidase activity IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
BP GO:0016197 endosomal transport IEP Predicted GO
BP GO:0016482 cytosolic transport IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
CC GO:0030906 retromer, cargo-selective complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0042147 retrograde transport, endosome to Golgi IEP Predicted GO
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!