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  5. LOC_Os05g05490

LOC_Os05g05490


Description : pentatricopeptide, putative, expressed


Gene families : OG_42_0009605 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g05490
Cluster HCCA clusters: cluster_0032

Target Alias Description ECC score Gene Family Method Actions
HORVU7Hr1G018390.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005575 cellular_component IEP Predicted GO
MF GO:0008565 protein transporter activity IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032977 membrane insertase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 187 234
IPR002885 Pentatricopeptide_repeat 388 436
IPR002885 Pentatricopeptide_repeat 293 319
IPR002885 Pentatricopeptide_repeat 58 86
IPR002885 Pentatricopeptide_repeat 264 283
No external refs found!