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  5. Solyc01g086850

Solyc01g086850


Description : Ras-related protein RGP1 (AHRD V3.3 *** RLGP1_ORYSJ)


Gene families : OG_42_0000131 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000131_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc01g086850
Cluster HCCA clusters: Cluster_179

Target Alias Description ECC score Gene Family Method Actions
At5g59150 No alias Ras-related protein RABA2d... 0.05 Orthogroups_2024-Update
Bradi1g38190 No alias RAB GTPase homolog A1D 0.03 Orthogroups_2024-Update
GRMZM2G020661 No alias RAB GTPase homolog A1F 0.02 Orthogroups_2024-Update
HORVU1Hr1G001920.3 No alias A-class RAB GTPase 0.03 Orthogroups_2024-Update
LOC_Os01g47730 No alias ras-related protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.008G061300 No alias RAB GTPase homolog A2B 0.03 Orthogroups_2024-Update
Sobic.002G271600.1 No alias A-class RAB GTPase 0.02 Orthogroups_2024-Update
Sopen12g005850 No alias Ras family 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA InterProScan predictions
BP GO:0007264 small GTPase mediated signal transduction IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
BP GO:0009250 glucan biosynthetic process IEP Predicted GO
MF GO:0015035 protein disulfide oxidoreductase activity IEP Predicted GO
MF GO:0015036 disulfide oxidoreductase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0030243 cellulose metabolic process IEP Predicted GO
BP GO:0030244 cellulose biosynthetic process IEP Predicted GO
MF GO:0031072 heat shock protein binding IEP Predicted GO
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0051273 beta-glucan metabolic process IEP Predicted GO
BP GO:0051274 beta-glucan biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001806 Small_GTPase 18 178
No external refs found!