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  5. LOC_Os05g09480

LOC_Os05g09480


Description : OsIAA16 - Auxin-responsive Aux/IAA gene family member, expressed


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g09480
Cluster HCCA clusters: cluster_0034

Target Alias Description ECC score Gene Family Method Actions
A4A49_38992 No alias auxin-responsive protein iaa26 0.03 Orthogroups_2024-Update
At1g04100 No alias Auxin-responsive protein IAA10... 0.02 Orthogroups_2024-Update
At1g04550 No alias Auxin-responsive protein IAA12... 0.03 Orthogroups_2024-Update
At2g33310 No alias Auxin-responsive protein IAA13... 0.03 Orthogroups_2024-Update
At5g25890 No alias Auxin-responsive protein [Source:UniProtKB/TrEMBL;Acc:Q2VWA1] 0.02 Orthogroups_2024-Update
Bradi1g55370 No alias AUX/IAA transcriptional regulator family protein 0.02 Orthogroups_2024-Update
Bradi2g04910 No alias AUX/IAA transcriptional regulator family protein 0.04 Orthogroups_2024-Update
Bradi2g05650 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Bradi2g33417 No alias phytochrome-associated protein 1 0.02 Orthogroups_2024-Update
Brara.C03574.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.C03613.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.E01960.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.F00165.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.H00763.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Brara.J00240.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
GRMZM2G138268 No alias indoleacetic acid-induced protein 16 0.04 Orthogroups_2024-Update
Glyma.20G225000 No alias indoleacetic acid-induced protein 16 0.03 Orthogroups_2024-Update
HORVU1Hr1G086070.6 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
HORVU3Hr1G022540.2 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
HORVU5Hr1G014290.2 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
HORVU5Hr1G093640.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
HORVU7Hr1G084940.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
LOC_Os12g40890 No alias OsIAA30 - Auxin-responsive Aux/IAA gene family member, expressed 0.03 Orthogroups_2024-Update
MA_10431093g0030 No alias (p0c132|iaa30_orysa : 229.0) Auxin-responsive protein... 0.04 Orthogroups_2024-Update
MA_18664g0010 No alias (at3g16500 : 144.0) phytochrome-associated protein 1... 0.03 Orthogroups_2024-Update
PSME_00034536-RA No alias (at5g65670 : 239.0) auxin (indole-3-acetic acid) induced... 0.03 Orthogroups_2024-Update
PSME_00041783-RA No alias (at3g16500 : 145.0) phytochrome-associated protein 1... 0.03 Orthogroups_2024-Update
Potri.001G186100 No alias phytochrome-associated protein 2 0.03 Orthogroups_2024-Update
Potri.002G044900 No alias indole-3-acetic acid inducible 14 0.02 Orthogroups_2024-Update
Potri.002G108000 No alias indole-3-acetic acid inducible 9 0.03 Orthogroups_2024-Update
Potri.010G078400 No alias AUX/IAA transcriptional regulator family protein 0.03 Orthogroups_2024-Update
Potri.018G057000 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Seita.5G268600.1 No alias transcriptional repressor *(IAA/AUX) 0.04 Orthogroups_2024-Update
Sobic.003G044900.1 No alias transcriptional repressor *(IAA/AUX) 0.02 Orthogroups_2024-Update
Solyc04g076850 No alias entire 0.02 Orthogroups_2024-Update
Solyc06g008590 No alias auxin-regulated IAA17 0.02 Orthogroups_2024-Update
Solyc06g053830 No alias auxin-regulated IAA7 0.02 Orthogroups_2024-Update
Solyc06g053840 No alias auxin-regulated IAA4 0.02 Orthogroups_2024-Update
Solyc12g096980 No alias auxin-regulated IAA11 0.02 Orthogroups_2024-Update
Sopen03g039290 No alias AUX/IAA family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000159 protein phosphatase type 2A complex IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004455 ketol-acid reductoisomerase activity IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
CC GO:0008287 protein serine/threonine phosphatase complex IEP Predicted GO
MF GO:0008987 quinolinate synthetase A activity IEP Predicted GO
BP GO:0009081 branched-chain amino acid metabolic process IEP Predicted GO
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Predicted GO
BP GO:0009435 NAD biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016049 cell growth IEP Predicted GO
MF GO:0019208 phosphatase regulator activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019674 NAD metabolic process IEP Predicted GO
MF GO:0019888 protein phosphatase regulator activity IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
BP GO:0040007 growth IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051539 4 iron, 4 sulfur cluster binding IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
CC GO:1903293 phosphatase complex IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 44 214
No external refs found!