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  5. LOC_Os05g10690

LOC_Os05g10690


Description : Myb transcription factor, putative, expressed


Gene families : OG_42_0000088 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000088_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g10690
Cluster HCCA clusters: cluster_0048

Target Alias Description ECC score Gene Family Method Actions
A4A49_23978 No alias transcription factor myb1r1 0.02 Orthogroups_2024-Update
Brara.C03606.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Glyma.05G032200 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G129900 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Glyma.20G060250 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G052710.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.03 Orthogroups_2024-Update
Potri.003G079500 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.006G150300 No alias myb-like transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.012G060300 No alias Duplicated homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Seita.5G183700.1 No alias MYB-RELATED transcription factor *(MYB-R-R) 0.02 Orthogroups_2024-Update
Solyc03g113620 No alias MYB transcription factor (AHRD V3.3 *** B2CZJ3_CAPAN) 0.03 Orthogroups_2024-Update
Solyc12g044610 No alias Myb transcription factor (AHRD V3.3 *** B1Q4U5_BRUGY) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004568 chitinase activity IEP Predicted GO
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006022 aminoglycan metabolic process IEP Predicted GO
BP GO:0006026 aminoglycan catabolic process IEP Predicted GO
BP GO:0006030 chitin metabolic process IEP Predicted GO
BP GO:0006032 chitin catabolic process IEP Predicted GO
BP GO:0006040 amino sugar metabolic process IEP Predicted GO
BP GO:0006778 porphyrin-containing compound metabolic process IEP Predicted GO
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
BP GO:0016998 cell wall macromolecule catabolic process IEP Predicted GO
CC GO:0019867 outer membrane IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0033013 tetrapyrrole metabolic process IEP Predicted GO
BP GO:0033014 tetrapyrrole biosynthetic process IEP Predicted GO
BP GO:0042737 drug catabolic process IEP Predicted GO
BP GO:0044036 cell wall macromolecule metabolic process IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046348 amino sugar catabolic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:0098588 bounding membrane of organelle IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901071 glucosamine-containing compound metabolic process IEP Predicted GO
BP GO:1901072 glucosamine-containing compound catabolic process IEP Predicted GO
BP GO:1901136 carbohydrate derivative catabolic process IEP Predicted GO
BP GO:1901565 organonitrogen compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 124 168
No external refs found!