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  5. Solyc08g005320

Solyc08g005320


Description : F-box family protein (AHRD V3.3 *** B9GFH4_POPTR)


Gene families : OG_42_0000867 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000867_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g005320
Cluster HCCA clusters: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
A4A49_32034 No alias putative f-boxlrr-repeat protein 0.03 Orthogroups_2024-Update
Solyc04g057950 No alias F-box family protein (AHRD V3.3 *** B9GFH4_POPTR) 0.06 Orthogroups_2024-Update
Solyc08g005360 No alias LOW QUALITY:F-box family protein (AHRD V3.3 *** B9GFH4_POPTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005088 Ras guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0005089 Rho guanyl-nucleotide exchange factor activity IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Predicted GO
BP GO:0015986 ATP synthesis coupled proton transport IEP Predicted GO
MF GO:0017016 Ras GTPase binding IEP Predicted GO
MF GO:0017048 Rho GTPase binding IEP Predicted GO
MF GO:0031267 small GTPase binding IEP Predicted GO
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Predicted GO
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Predicted GO
MF GO:0051020 GTPase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001810 F-box_dom 9 53
No external refs found!