1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g12380

LOC_Os05g12380


Description : expressed protein


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g12380
Cluster HCCA clusters: cluster_0057

Target Alias Description ECC score Gene Family Method Actions
AC216886.3_FG002 No alias TRICHOME BIREFRINGENCE-LIKE 21 0.02 Orthogroups_2024-Update
At1g01430 No alias Protein trichome birefringence-like 25... 0.02 Orthogroups_2024-Update
HORVU7Hr1G039180.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G039420.8 No alias xyloglucan O-acetyltransferase *(AXY4) 0.02 Orthogroups_2024-Update
LOC_Os06g12820 No alias proteins of unknown function domain containing protein,... 0.02 Orthogroups_2024-Update
LOC_Os06g16170 No alias expressed protein 0.03 Orthogroups_2024-Update
MA_245850g0010 No alias (at4g23790 : 327.0) Encodes a member of the TBL... 0.03 Orthogroups_2024-Update
Sopen02g034400 No alias GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Predicted GO
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
BP GO:0006270 DNA replication initiation IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008236 serine-type peptidase activity IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0009055 electron transfer activity IEP Predicted GO
MF GO:0017171 serine hydrolase activity IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 125 418
IPR025846 PMR5_N_dom 72 124
No external refs found!