- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : F-box/kelch-repeat protein SKIP25, putative (AHRD V3.3 *** G7K6R4_MEDTR)
Gene families : OG_42_0005039 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005039_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Solyc08g005930 | |
| Cluster | HCCA clusters: Cluster_130 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Glyma.09G215301 | No alias | KAR-UP F-box 1 | 0.02 | Orthogroups_2024-Update | |
| Pp1s45_187V6 | No alias | T19E23.14; F-box family protein [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
| Sopen08g001900 | No alias | hypothetical protein | 0.1 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | Predicted GO |
| MF | GO:0003951 | NAD+ kinase activity | IEP | Predicted GO |
| MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | Predicted GO |
| MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0005509 | calcium ion binding | IEP | Predicted GO |
| BP | GO:0006541 | glutamine metabolic process | IEP | Predicted GO |
| BP | GO:0006542 | glutamine biosynthetic process | IEP | Predicted GO |
| BP | GO:0006732 | coenzyme metabolic process | IEP | Predicted GO |
| BP | GO:0006733 | oxidoreduction coenzyme metabolic process | IEP | Predicted GO |
| BP | GO:0006739 | NADP metabolic process | IEP | Predicted GO |
| BP | GO:0006741 | NADP biosynthetic process | IEP | Predicted GO |
| BP | GO:0006753 | nucleoside phosphate metabolic process | IEP | Predicted GO |
| BP | GO:0006814 | sodium ion transport | IEP | Predicted GO |
| BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
| BP | GO:0009108 | coenzyme biosynthetic process | IEP | Predicted GO |
| BP | GO:0009117 | nucleotide metabolic process | IEP | Predicted GO |
| MF | GO:0010277 | chlorophyllide a oxygenase [overall] activity | IEP | Predicted GO |
| BP | GO:0015969 | guanosine tetraphosphate metabolic process | IEP | Predicted GO |
| MF | GO:0016211 | ammonia ligase activity | IEP | Predicted GO |
| MF | GO:0016703 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) | IEP | Predicted GO |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
| MF | GO:0016829 | lyase activity | IEP | Predicted GO |
| MF | GO:0016832 | aldehyde-lyase activity | IEP | Predicted GO |
| MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Predicted GO |
| BP | GO:0017006 | protein-tetrapyrrole linkage | IEP | Predicted GO |
| BP | GO:0017007 | protein-bilin linkage | IEP | Predicted GO |
| BP | GO:0017009 | protein-phycocyanobilin linkage | IEP | Predicted GO |
| BP | GO:0019359 | nicotinamide nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0019362 | pyridine nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0019363 | pyridine nucleotide biosynthetic process | IEP | Predicted GO |
| BP | GO:0019637 | organophosphate metabolic process | IEP | Predicted GO |
| BP | GO:0030163 | protein catabolic process | IEP | Predicted GO |
| MF | GO:0030976 | thiamine pyrophosphate binding | IEP | Predicted GO |
| BP | GO:0033865 | nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0033875 | ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034032 | purine nucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0034035 | purine ribonucleoside bisphosphate metabolic process | IEP | Predicted GO |
| BP | GO:0046496 | nicotinamide nucleotide metabolic process | IEP | Predicted GO |
| BP | GO:0051188 | cofactor biosynthetic process | IEP | Predicted GO |
| MF | GO:0051537 | 2 iron, 2 sulfur cluster binding | IEP | Predicted GO |
| BP | GO:0055086 | nucleobase-containing small molecule metabolic process | IEP | Predicted GO |
| BP | GO:0072524 | pyridine-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0072525 | pyridine-containing compound biosynthetic process | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |