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  5. LOC_Os05g22614

LOC_Os05g22614


Description : PTAC16, putative, expressed


Gene families : OG_42_0008396 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g22614
Cluster HCCA clusters: cluster_0010

Target Alias Description ECC score Gene Family Method Actions
Brara.A02435.1 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.02 Orthogroups_2024-Update
Glyma.11G135900 No alias plastid transcriptionally active 16 0.04 Orthogroups_2024-Update
HORVU3Hr1G065580.5 No alias Unknown function 0.04 Orthogroups_2024-Update
Kfl00302_0070 kfl00302_0070_v1.1 (at3g46780 : 160.0) plastid transcriptionally active 16... 0.02 Orthogroups_2024-Update
Potri.001G244800 No alias plastid transcriptionally active 16 0.03 Orthogroups_2024-Update
Pp1s230_36V6 No alias pyridine nucleotide binding protein 0.02 Orthogroups_2024-Update
Sobic.009G091800.2 No alias cofactor of plastid-encoded RNA polymerase *(TAC16) 0.04 Orthogroups_2024-Update
Sobic.009G091850.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003682 chromatin binding IEP Predicted GO
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0006099 tricarboxylic acid cycle IEP Predicted GO
BP GO:0006101 citrate metabolic process IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009538 photosystem I reaction center IEP Predicted GO
MF GO:0009982 pseudouridine synthase activity IEP Predicted GO
BP GO:0015977 carbon fixation IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016866 intramolecular transferase activity IEP Predicted GO
BP GO:0016999 antibiotic metabolic process IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
BP GO:0072350 tricarboxylic acid metabolic process IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR016040 NAD(P)-bd_dom 94 309
No external refs found!