1. Home
  2. Species
  3. Oryza sativa
  4. Sequence
  5. LOC_Os05g22870

LOC_Os05g22870


Description : PPR repeat domain containing protein, putative, expressed


Gene families : OG_42_0005726 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005726_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g22870
Cluster HCCA clusters: cluster_0094

Target Alias Description ECC score Gene Family Method Actions
Brara.C02534.1 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU2Hr1G067790.15 No alias Unknown function 0.05 Orthogroups_2024-Update
PSME_00041170-RA No alias (at3g13770 : 132.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 477 526
IPR002885 Pentatricopeptide_repeat 408 456
IPR002885 Pentatricopeptide_repeat 620 667
IPR002885 Pentatricopeptide_repeat 304 347
IPR002885 Pentatricopeptide_repeat 540 592
No external refs found!