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  5. Solyc08g006300

Solyc08g006300


Description : Fasciclin-like arabinogalactan protein (AHRD V3.3 *** A0A072VDV7_MEDTR)


Gene families : OG_42_0000318 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000318_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc08g006300
Cluster HCCA clusters: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
Brara.E02839.1 No alias Fasciclin-type arabinogalactan protein 0.02 Orthogroups_2024-Update
Brara.I04200.1 No alias regulatory protein *(DEAP1) of exine formation &... 0.04 Orthogroups_2024-Update
Solyc06g076110 No alias Fasciclin-like arabinogalactan family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000782 FAS1_domain 33 132
No external refs found!