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  5. LOC_Os05g24790

LOC_Os05g24790


Description : transposon protein, putative, unclassified, expressed


Gene families : OG_42_0000049 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000049_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Oryza release: LOC_Os05g24790
Cluster HCCA clusters: cluster_0042

Target Alias Description ECC score Gene Family Method Actions
Glyma.07G169600 No alias hAT dimerisation domain-containing protein / transposase-related 0.03 Orthogroups_2024-Update
MA_10200277g0020 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00013591-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
PSME_00019827-RA No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Solyc02g050160 No alias No description available 0.02 Orthogroups_2024-Update
Solyc10g047710 No alias No description available 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0009690 cytokinin metabolic process IEP Predicted GO
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP Predicted GO
BP GO:0010817 regulation of hormone levels IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Predicted GO
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP Predicted GO
MF GO:0019139 cytokinin dehydrogenase activity IEP Predicted GO
BP GO:0034754 cellular hormone metabolic process IEP Predicted GO
BP GO:0042445 hormone metabolic process IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
InterPro domains Description Start Stop
IPR007021 DUF659 100 243
No external refs found!